Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm37935-201ENSMUST00000192012 982 ntBASIC13.84□□□□□ -0.19
Trove2O08848 Gm20910-201ENSMUST00000193268 696 ntBASIC13.84□□□□□ -0.19
Trove2O08848 Gm21871-201ENSMUST00000194621 696 ntBASIC13.84□□□□□ -0.19
Trove2O08848 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.84□□□□□ -0.19
Trove2O08848 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.84□□□□□ -0.19
Trove2O08848 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.84□□□□□ -0.19
Trove2O08848 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trove2O08848 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trove2O08848 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trove2O08848 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.84□□□□□ -0.19
Trove2O08848 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trove2O08848 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trove2O08848 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trove2O08848 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trove2O08848 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trove2O08848 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trove2O08848 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trove2O08848 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Gm12882-201ENSMUST00000121696 517 ntBASIC13.83□□□□□ -0.2
Trove2O08848 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trove2O08848 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.83□□□□□ -0.2
Trove2O08848 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 Gm43474-201ENSMUST00000196415 774 ntBASIC13.83□□□□□ -0.2
Trove2O08848 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.83□□□□□ -0.2
Trove2O08848 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trove2O08848 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trove2O08848 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trove2O08848 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.82□□□□□ -0.2
Trove2O08848 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.82□□□□□ -0.2
Trove2O08848 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.82□□□□□ -0.2
Trove2O08848 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trove2O08848 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.82□□□□□ -0.2
Trove2O08848 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Gm24158-201ENSMUST00000175263 71 ntBASIC13.82□□□□□ -0.2
Trove2O08848 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.82□□□□□ -0.2
Trove2O08848 Chchd1-203ENSMUST00000224633 557 ntBASIC13.82□□□□□ -0.2
Trove2O08848 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.82□□□□□ -0.2
Trove2O08848 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.82□□□□□ -0.2
Trove2O08848 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trove2O08848 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.82□□□□□ -0.2
Trove2O08848 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trove2O08848 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trove2O08848 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trove2O08848 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trove2O08848 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms