Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.95□□□□□ -0.5
Raet1aO08602 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Raet1aO08602 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Raet1aO08602 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Raet1aO08602 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.94□□□□□ -0.5
Raet1aO08602 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.94□□□□□ -0.5
Raet1aO08602 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Raet1aO08602 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Gm42612-201ENSMUST00000197986 623 ntBASIC11.94□□□□□ -0.5
Raet1aO08602 Gm43170-201ENSMUST00000199827 612 ntBASIC11.94□□□□□ -0.5
Raet1aO08602 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.94□□□□□ -0.5
Raet1aO08602 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Raet1aO08602 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Raet1aO08602 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Raet1aO08602 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Raet1aO08602 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.93□□□□□ -0.5
Raet1aO08602 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.93□□□□□ -0.5
Raet1aO08602 Gm15376-201ENSMUST00000122258 783 ntBASIC11.93□□□□□ -0.5
Raet1aO08602 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Raet1aO08602 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Raet1aO08602 Gm19078-201ENSMUST00000206311 727 ntBASIC11.93□□□□□ -0.5
Raet1aO08602 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Gm5161-201ENSMUST00000075243 853 ntBASIC11.93□□□□□ -0.5
Raet1aO08602 Gm24447-201ENSMUST00000083977 338 ntBASIC11.93□□□□□ -0.5
Raet1aO08602 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Raet1aO08602 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.93□□□□□ -0.5
Raet1aO08602 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Raet1aO08602 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Raet1aO08602 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Raet1aO08602 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Raet1aO08602 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Raet1aO08602 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Raet1aO08602 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Raet1aO08602 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms