Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lnp1A0A1B0GSK3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lnp1A0A1B0GSK3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.21□□□□□ -0.61
Lnp1A0A1B0GSK3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lnp1A0A1B0GSK3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lnp1A0A1B0GSK3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lnp1A0A1B0GSK3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lnp1A0A1B0GSK3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm7730-201ENSMUST00000212486 454 ntBASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lnp1A0A1B0GSK3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm5279-201ENSMUST00000199575 745 ntBASIC11.19□□□□□ -0.62
Lnp1A0A1B0GSK3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms