Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ube4bQ9ES00 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Psmb5-202ENSMUST00000227257 622 ntBASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Gm7461-201ENSMUST00000058918 827 ntBASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ube4bQ9ES00 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Gm16026-204ENSMUST00000162652 683 ntBASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Thap2-203ENSMUST00000218989 527 ntBASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Gm10154-201ENSMUST00000084445 354 ntBASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ube4bQ9ES00 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ube4bQ9ES00 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms