Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm6218-201ENSMUST00000219812 628 ntBASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx56Q9D0R4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Gm10576-201ENSMUST00000191927 825 ntBASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx56Q9D0R4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Grk6-205ENSMUST00000224653 2976 ntBASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx56Q9D0R4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Gm19220-201ENSMUST00000222682 803 ntBASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Syt7-205ENSMUST00000224135 1557 ntBASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx56Q9D0R4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms