Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Mir8117-201ENSMUST00000184773 107 ntBASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Gm38225-201ENSMUST00000194001 393 ntBASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc58Q8R3Q6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc58Q8R3Q6 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.08□□□□□ -0.47
Ccdc58Q8R3Q6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Ccdc58Q8R3Q6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm13823-201ENSMUST00000119930 345 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm20553-201ENSMUST00000204205 844 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm18057-201ENSMUST00000208220 503 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms