Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.8□□□□□ -0.36
Ubqln1Q8R317 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln1Q8R317 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubqln1Q8R317 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gm5354-201ENSMUST00000182417 973 ntBASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubqln1Q8R317 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ubqln1Q8R317 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.77□□□□□ -0.36
Ubqln1Q8R317 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.36
Ubqln1Q8R317 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ubqln1Q8R317 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms