Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfwd3Q8CIK8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfwd3Q8CIK8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gm43094-201ENSMUST00000196549 921 ntBASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gm19078-201ENSMUST00000206311 727 ntBASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfwd3Q8CIK8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms