Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Mir125a-201ENSMUST00000083545 68 ntBASIC13.31□□□□□ -0.28
Vps50Q8CI71 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Syt7-204ENSMUST00000223586 1344 ntBASIC13.31□□□□□ -0.28
Vps50Q8CI71 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.31□□□□□ -0.28
Vps50Q8CI71 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps50Q8CI71 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Vps50Q8CI71 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Gm10275-202ENSMUST00000168697 495 ntBASIC13.3□□□□□ -0.28
Vps50Q8CI71 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.3□□□□□ -0.28
Vps50Q8CI71 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Gm10275-201ENSMUST00000092620 635 ntBASIC13.3□□□□□ -0.28
Vps50Q8CI71 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps50Q8CI71 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.29□□□□□ -0.28
Vps50Q8CI71 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm24694-201ENSMUST00000180054 110 ntBASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm27663-201ENSMUST00000184839 110 ntBASIC13.29□□□□□ -0.28
Vps50Q8CI71 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps50Q8CI71 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.29□□□□□ -0.28
Vps50Q8CI71 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps50Q8CI71 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms