Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap1Q8BTW8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm8598-201ENSMUST00000221184 836 ntBASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk5rap1Q8BTW8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm13226-201ENSMUST00000117838 404 ntBASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms