Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Gm13492-201ENSMUST00000119772 665 ntBASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Col16a1Q8BLX7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm12291-201ENSMUST00000121627 311 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm45224-201ENSMUST00000208203 414 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 AC154680.1-201ENSMUST00000224376 859 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.34■□□□□ 0.37
Col16a1Q8BLX7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 n-R5s14-201ENSMUST00000122688 107 ntBASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gm27023-201ENSMUST00000182372 285 ntBASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col16a1Q8BLX7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col16a1Q8BLX7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm3096-201ENSMUST00000185770 364 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Daam2-202ENSMUST00000224595 1926 ntBASIC17.32■□□□□ 0.36
Col16a1Q8BLX7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms