Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp1Q8BJQ2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp1Q8BJQ2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp1Q8BJQ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp1Q8BJQ2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms