Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn1Q64347 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.06■□□□□ 0.32
Clcn1Q64347 Gm43758-201ENSMUST00000199500 367 ntBASIC17.06■□□□□ 0.32
Clcn1Q64347 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.06■□□□□ 0.32
Clcn1Q64347 Gm7783-201ENSMUST00000204795 781 ntBASIC17.06■□□□□ 0.32
Clcn1Q64347 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.06■□□□□ 0.32
Clcn1Q64347 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn1Q64347 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn1Q64347 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clcn1Q64347 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Clcn1Q64347 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.05■□□□□ 0.32
Clcn1Q64347 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Gm6222-202ENSMUST00000182143 629 ntBASIC17.05■□□□□ 0.32
Clcn1Q64347 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.05■□□□□ 0.32
Clcn1Q64347 Gm43133-201ENSMUST00000197472 463 ntBASIC17.05■□□□□ 0.32
Clcn1Q64347 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clcn1Q64347 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn1Q64347 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clcn1Q64347 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Clcn1Q64347 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Gm4857-201ENSMUST00000192718 785 ntBASIC17.04■□□□□ 0.32
Clcn1Q64347 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clcn1Q64347 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn1Q64347 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Clcn1Q64347 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms