Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.41□□□□□ -0.42
Urb1Q571H0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Gm10146-201ENSMUST00000072739 309 ntBASIC12.41□□□□□ -0.42
Urb1Q571H0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.41□□□□□ -0.42
Urb1Q571H0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Urb1Q571H0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Urb1Q571H0 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.41□□□□□ -0.42
Urb1Q571H0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm6082-201ENSMUST00000215204 454 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Gm29608-201ENSMUST00000190444 463 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Rps4l-202ENSMUST00000204242 789 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Urb1Q571H0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Mir433-201ENSMUST00000093564 124 ntBASIC12.4□□□□□ -0.42
Urb1Q571H0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Urb1Q571H0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Urb1Q571H0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Urb1Q571H0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Urb1Q571H0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Urb1Q571H0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Urb1Q571H0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Urb1Q571H0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Urb1Q571H0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.39□□□□□ -0.43
Urb1Q571H0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Urb1Q571H0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Urb1Q571H0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.39□□□□□ -0.43
Urb1Q571H0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Urb1Q571H0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms