Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.63□□□□□ -0.39
Six5P70178 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.63□□□□□ -0.39
Six5P70178 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Six5P70178 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six5P70178 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Six5P70178 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Six5P70178 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Six5P70178 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Six5P70178 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.62□□□□□ -0.39
Six5P70178 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Six5P70178 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Six5P70178 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Six5P70178 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.62□□□□□ -0.39
Six5P70178 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.62□□□□□ -0.39
Six5P70178 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.62□□□□□ -0.39
Six5P70178 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.62□□□□□ -0.39
Six5P70178 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Six5P70178 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six5P70178 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.61□□□□□ -0.39
Six5P70178 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.61□□□□□ -0.39
Six5P70178 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Gm12859-201ENSMUST00000117834 427 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm12403-201ENSMUST00000121384 959 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.61□□□□□ -0.39
Six5P70178 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.61□□□□□ -0.39
Six5P70178 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.61□□□□□ -0.39
Six5P70178 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Gm15823-201ENSMUST00000064305 670 ntBASIC12.61□□□□□ -0.39
Six5P70178 Gm2423-201ENSMUST00000074863 733 ntBASIC12.61□□□□□ -0.39
Six5P70178 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Six5P70178 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Six5P70178 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.61□□□□□ -0.39
Six5P70178 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six5P70178 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms