Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Mir7085-201ENSMUST00000184353 66 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm7561-201ENSMUST00000211203 886 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.12□□□□□ -0.63
Cdkn1aP39689 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cdkn1aP39689 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.11□□□□□ -0.63
Cdkn1aP39689 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.11□□□□□ -0.63
Cdkn1aP39689 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn1aP39689 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn1aP39689 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn1aP39689 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms