Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.3□□□□□ -0.44
Col4a2P08122 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Gm14726-201ENSMUST00000120623 896 ntBASIC12.3□□□□□ -0.44
Col4a2P08122 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.3□□□□□ -0.44
Col4a2P08122 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.3□□□□□ -0.44
Col4a2P08122 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.3□□□□□ -0.44
Col4a2P08122 AA914427-201ENSMUST00000193194 1166 ntBASIC12.3□□□□□ -0.44
Col4a2P08122 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.3□□□□□ -0.44
Col4a2P08122 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a2P08122 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a2P08122 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.3□□□□□ -0.44
Col4a2P08122 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Col4a2P08122 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a2P08122 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a2P08122 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col4a2P08122 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col4a2P08122 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col4a2P08122 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Gm23270-201ENSMUST00000104055 131 ntBASIC12.29□□□□□ -0.44
Col4a2P08122 Gm14028-201ENSMUST00000117434 479 ntBASIC12.29□□□□□ -0.44
Col4a2P08122 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.29□□□□□ -0.44
Col4a2P08122 Gm8738-201ENSMUST00000172606 329 ntBASIC12.29□□□□□ -0.44
Col4a2P08122 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col4a2P08122 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a2P08122 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Col4a2P08122 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.29□□□□□ -0.44
Col4a2P08122 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a2P08122 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a2P08122 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Col4a2P08122 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.29□□□□□ -0.44
Col4a2P08122 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a2P08122 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col4a2P08122 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Col4a2P08122 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col4a2P08122 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.28□□□□□ -0.44
Col4a2P08122 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm8805-201ENSMUST00000117848 313 ntBASIC12.28□□□□□ -0.44
Col4a2P08122 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.28□□□□□ -0.44
Col4a2P08122 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col4a2P08122 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.28□□□□□ -0.44
Col4a2P08122 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms