Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P06323 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P06323 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Gm15460-201ENSMUST00000118147 391 ntBASIC10.93□□□□□ -0.66
P06323 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.93□□□□□ -0.66
P06323 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P06323 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.93□□□□□ -0.66
P06323 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.93□□□□□ -0.66
P06323 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
P06323 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
P06323 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
P06323 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
P06323 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P06323 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P06323 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06323 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P06323 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.93□□□□□ -0.66
P06323 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
P06323 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
P06323 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.92□□□□□ -0.66
P06323 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
P06323 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
P06323 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.92□□□□□ -0.66
P06323 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.92□□□□□ -0.66
P06323 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Gm27622-201ENSMUST00000183779 60 ntBASIC10.92□□□□□ -0.66
P06323 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.92□□□□□ -0.66
P06323 Gm21470-201ENSMUST00000187680 696 ntBASIC10.92□□□□□ -0.66
P06323 Gm28630-201ENSMUST00000187806 498 ntBASIC10.92□□□□□ -0.66
P06323 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.92□□□□□ -0.66
P06323 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Mir497b-201ENSMUST00000093601 125 ntBASIC10.92□□□□□ -0.66
P06323 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
P06323 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P06323 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
P06323 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06323 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms