Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P04940 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P04940 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P04940 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.93□□□□□ -0.66
P04940 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.93□□□□□ -0.66
P04940 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.93□□□□□ -0.66
P04940 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.93□□□□□ -0.66
P04940 Gm29608-201ENSMUST00000190444 463 ntBASIC10.93□□□□□ -0.66
P04940 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.93□□□□□ -0.66
P04940 Gm38223-201ENSMUST00000194484 695 ntBASIC10.93□□□□□ -0.66
P04940 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.93□□□□□ -0.66
P04940 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
P04940 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.93□□□□□ -0.66
P04940 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.93□□□□□ -0.66
P04940 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
P04940 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.93□□□□□ -0.66
P04940 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04940 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P04940 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P04940 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
P04940 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
P04940 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
P04940 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.92□□□□□ -0.66
P04940 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P04940 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
P04940 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.92□□□□□ -0.66
P04940 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Gm12341-201ENSMUST00000119724 503 ntBASIC10.92□□□□□ -0.66
P04940 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
P04940 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.92□□□□□ -0.66
P04940 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.92□□□□□ -0.66
P04940 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Mir6977-201ENSMUST00000184960 64 ntBASIC10.92□□□□□ -0.66
P04940 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.92□□□□□ -0.66
P04940 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Gm42550-201ENSMUST00000201553 960 ntBASIC10.92□□□□□ -0.66
P04940 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.92□□□□□ -0.66
P04940 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P04940 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P04940 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
P04940 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04940 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms