Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Gm11918-201ENSMUST00000121660 179 ntBASIC13.32□□□□□ -0.28
Pdlim1O70400 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.32□□□□□ -0.28
Pdlim1O70400 Gm2495-201ENSMUST00000191160 466 ntBASIC13.32□□□□□ -0.28
Pdlim1O70400 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.32□□□□□ -0.28
Pdlim1O70400 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm45384-201ENSMUST00000210451 277 ntBASIC13.31□□□□□ -0.28
Pdlim1O70400 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.31□□□□□ -0.28
Pdlim1O70400 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.31□□□□□ -0.28
Pdlim1O70400 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm26315-201ENSMUST00000083890 321 ntBASIC13.31□□□□□ -0.28
Pdlim1O70400 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim1O70400 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim1O70400 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Gm5687-201ENSMUST00000118252 640 ntBASIC13.3□□□□□ -0.28
Pdlim1O70400 Gm12490-201ENSMUST00000120255 560 ntBASIC13.3□□□□□ -0.28
Pdlim1O70400 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.3□□□□□ -0.28
Pdlim1O70400 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Gm29608-201ENSMUST00000190444 463 ntBASIC13.3□□□□□ -0.28
Pdlim1O70400 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdlim1O70400 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdlim1O70400 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms