Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1fQ9JIS7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm27046-201ENSMUST00000182160 463 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Mir433-201ENSMUST00000093564 124 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Daam2-202ENSMUST00000224595 1926 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm14726-201ENSMUST00000120623 896 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm37201-201ENSMUST00000191845 523 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1fQ9JIS7 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1fQ9JIS7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Gm15276-201ENSMUST00000145953 498 ntBASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 AA914427-201ENSMUST00000193194 1166 ntBASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1fQ9JIS7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms