Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.18□□□□□ -0.14
Clp1Q99LI9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Gm26185-201ENSMUST00000157692 266 ntBASIC14.17□□□□□ -0.14
Clp1Q99LI9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clp1Q99LI9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.16□□□□□ -0.14
Clp1Q99LI9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Gm28693-202ENSMUST00000190758 331 ntBASIC14.16□□□□□ -0.14
Clp1Q99LI9 Gm3786-201ENSMUST00000202659 378 ntBASIC14.16□□□□□ -0.14
Clp1Q99LI9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clp1Q99LI9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.15□□□□□ -0.14
Clp1Q99LI9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.15□□□□□ -0.14
Clp1Q99LI9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms