Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.61□□□□□ -0.23
Cdk9Q99J95 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.61□□□□□ -0.23
Cdk9Q99J95 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdk9Q99J95 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.61□□□□□ -0.23
Cdk9Q99J95 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.61□□□□□ -0.23
Cdk9Q99J95 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Gm23935-201ENSMUST00000102303 57 ntBASIC13.6□□□□□ -0.23
Cdk9Q99J95 Gm24270-201ENSMUST00000102326 57 ntBASIC13.6□□□□□ -0.23
Cdk9Q99J95 Gm24245-201ENSMUST00000157318 57 ntBASIC13.6□□□□□ -0.23
Cdk9Q99J95 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk9Q99J95 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Gm20553-201ENSMUST00000204205 844 ntBASIC13.59□□□□□ -0.23
Cdk9Q99J95 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms