Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm26226-201ENSMUST00000082509 116 ntBASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Mir6956-201ENSMUST00000183598 62 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Gm28877-201ENSMUST00000191349 604 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Gm43125-201ENSMUST00000201724 730 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Olfr286-202ENSMUST00000205305 969 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb3Q91XZ7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb3Q91XZ7 Matn2-203ENSMUST00000226766 3252 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gm2451-201ENSMUST00000199447 999 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gm10290-201ENSMUST00000200451 999 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb3Q91XZ7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms