Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Gm5187-201ENSMUST00000117317 991 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 Gm8062-201ENSMUST00000139696 444 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 Snora73a-201ENSMUST00000082453 205 ntBASIC14.37□□□□□ -0.11
TraipQ8VIG6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.36□□□□□ -0.11
TraipQ8VIG6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.36□□□□□ -0.11
TraipQ8VIG6 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Gm17420-201ENSMUST00000164753 153 ntBASIC14.36□□□□□ -0.11
TraipQ8VIG6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.36□□□□□ -0.11
TraipQ8VIG6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TraipQ8VIG6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.35□□□□□ -0.11
TraipQ8VIG6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gm6447-201ENSMUST00000118905 835 ntBASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gm1335-201ENSMUST00000121653 386 ntBASIC14.35□□□□□ -0.11
TraipQ8VIG6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gm5370-201ENSMUST00000187187 574 ntBASIC14.35□□□□□ -0.11
TraipQ8VIG6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TraipQ8VIG6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TraipQ8VIG6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
TraipQ8VIG6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms