Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Gm15678-201ENSMUST00000117573 960 ntBASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm1Q8VC85 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Syt7-205ENSMUST00000224135 1557 ntBASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm1Q8VC85 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Gm13453-201ENSMUST00000118708 357 ntBASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Gm37935-201ENSMUST00000192012 982 ntBASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.96□□□□□ -0.33
Lsm1Q8VC85 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms