Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gm4984-201ENSMUST00000115987 360 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gm12341-201ENSMUST00000119724 503 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps53Q8CCB4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Gm29741-201ENSMUST00000192667 421 ntBASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps53Q8CCB4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps53Q8CCB4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps53Q8CCB4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Vps53Q8CCB4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.71■□□□□ 0.1
Vps53Q8CCB4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps53Q8CCB4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps53Q8CCB4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Gm11425-201ENSMUST00000119608 498 ntBASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps53Q8CCB4 Gm9396-201ENSMUST00000076703 567 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms