Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm4271-201ENSMUST00000174444 973 ntBASIC14.3□□□□□ -0.12
Rd3Q8BRE0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm18054-201ENSMUST00000207539 555 ntBASIC14.3□□□□□ -0.12
Rd3Q8BRE0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rd3Q8BRE0 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm27682-201ENSMUST00000183930 110 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm37008-201ENSMUST00000195712 319 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rd3Q8BRE0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms