Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Matn2-206ENSMUST00000228570 2798 ntBASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4dQ8BGV9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm15806-201ENSMUST00000120696 955 ntBASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4dQ8BGV9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms