Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3d21Q7TSG5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3d21Q7TSG5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm42612-201ENSMUST00000197986 623 ntBASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm5279-201ENSMUST00000199575 745 ntBASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm43170-201ENSMUST00000199827 612 ntBASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3d21Q7TSG5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Gm22189-201ENSMUST00000103822 86 ntBASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3d21Q7TSG5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms