Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Gm3222-201ENSMUST00000071282 990 ntBASIC13.29□□□□□ -0.28
Q3KNL4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3KNL4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Q3KNL4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3KNL4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Q3KNL4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Gm25144-201ENSMUST00000179561 110 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Gm25352-201ENSMUST00000179815 110 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Gm4804-201ENSMUST00000182234 999 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Q3KNL4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3KNL4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3KNL4 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Q3KNL4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3KNL4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.28□□□□□ -0.28
Q3KNL4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Q3KNL4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.27□□□□□ -0.28
Q3KNL4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Q3KNL4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3KNL4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.27□□□□□ -0.29
Q3KNL4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Q3KNL4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Q3KNL4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.27□□□□□ -0.29
Q3KNL4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3KNL4 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.27□□□□□ -0.29
Q3KNL4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3KNL4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Q3KNL4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3KNL4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3KNL4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Q3KNL4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Q3KNL4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Q3KNL4 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.26□□□□□ -0.29
Q3KNL4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms