Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.07□□□□□ -0.64
Trim63Q38HM4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Gm3375-201ENSMUST00000203929 796 ntBASIC11.07□□□□□ -0.64
Trim63Q38HM4 Gm45058-201ENSMUST00000205810 766 ntBASIC11.07□□□□□ -0.64
Trim63Q38HM4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.07□□□□□ -0.64
Trim63Q38HM4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.07□□□□□ -0.64
Trim63Q38HM4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim63Q38HM4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms