Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABREP78334 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABREP78334 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABREP78334 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GABREP78334 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABREP78334 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GABREP78334 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GABREP78334 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GABREP78334 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 MIR658-201ENST00000385210 100 ntBASIC15.64■□□□□ 0.09
GABREP78334 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 ZNF890P-202ENST00000530367 1156 ntBASIC15.64■□□□□ 0.09
GABREP78334 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.64■□□□□ 0.09
GABREP78334 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 KRT17P8-201ENST00000540749 863 ntBASIC15.64■□□□□ 0.09
GABREP78334 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 RAB43P1-201ENST00000561790 589 ntBASIC15.64■□□□□ 0.09
GABREP78334 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.64■□□□□ 0.09
GABREP78334 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.64■□□□□ 0.09
GABREP78334 CHCHD2P3-201ENST00000603038 451 ntBASIC15.64■□□□□ 0.09
GABREP78334 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.64■□□□□ 0.09
GABREP78334 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.64■□□□□ 0.09
GABREP78334 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABREP78334 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GABREP78334 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.63■□□□□ 0.09
GABREP78334 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GABREP78334 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.63■□□□□ 0.09
GABREP78334 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.63■□□□□ 0.09
GABREP78334 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.63■□□□□ 0.09
GABREP78334 AC079776.1-201ENST00000401540 1152 ntBASIC15.63■□□□□ 0.09
GABREP78334 AC112492.5-201ENST00000421897 457 ntBASIC15.63■□□□□ 0.09
GABREP78334 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.63■□□□□ 0.09
GABREP78334 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.63■□□□□ 0.09
GABREP78334 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.63■□□□□ 0.09
GABREP78334 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.63■□□□□ 0.09
GABREP78334 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.63■□□□□ 0.09
GABREP78334 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.63■□□□□ 0.09
GABREP78334 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.63■□□□□ 0.09
GABREP78334 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.63■□□□□ 0.09
GABREP78334 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
GABREP78334 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABREP78334 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 AL138688.1-201ENST00000624851 1594 ntBASIC15.62■□□□□ 0.09
GABREP78334 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms