Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 Gm27618-201ENSMUST00000183671 60 ntBASIC18.68■□□□□ 0.58
Stra8P70278 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Stra8P70278 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.68■□□□□ 0.58
Stra8P70278 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC18.67■□□□□ 0.58
Stra8P70278 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Mir1897-201ENSMUST00000122581 272 ntBASIC18.67■□□□□ 0.58
Stra8P70278 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Gm17837-201ENSMUST00000186435 985 ntBASIC18.67■□□□□ 0.58
Stra8P70278 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.67■□□□□ 0.58
Stra8P70278 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.67■□□□□ 0.58
Stra8P70278 Mir125a-201ENSMUST00000083545 68 ntBASIC18.67■□□□□ 0.58
Stra8P70278 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Stra8P70278 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.67■□□□□ 0.58
Stra8P70278 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Stra8P70278 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stra8P70278 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Stra8P70278 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Stra8P70278 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.66■□□□□ 0.58
Stra8P70278 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.66■□□□□ 0.58
Stra8P70278 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Stra8P70278 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stra8P70278 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Stra8P70278 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Stra8P70278 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Stra8P70278 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.65■□□□□ 0.58
Stra8P70278 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.65■□□□□ 0.58
Stra8P70278 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Dupd1-202ENSMUST00000224735 548 ntBASIC18.65■□□□□ 0.58
Stra8P70278 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Stra8P70278 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Stra8P70278 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.65■□□□□ 0.58
Stra8P70278 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stra8P70278 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Stra8P70278 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stra8P70278 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC18.64■□□□□ 0.58
Stra8P70278 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stra8P70278 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stra8P70278 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stra8P70278 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stra8P70278 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Stra8P70278 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Stra8P70278 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stra8P70278 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms