Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vbp1P61759 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vbp1P61759 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vbp1P61759 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vbp1P61759 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vbp1P61759 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.24□□□□□ -0.45
Vbp1P61759 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vbp1P61759 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vbp1P61759 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vbp1P61759 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Vbp1P61759 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vbp1P61759 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vbp1P61759 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vbp1P61759 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.23□□□□□ -0.45
Vbp1P61759 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Vbp1P61759 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Vbp1P61759 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vbp1P61759 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vbp1P61759 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vbp1P61759 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vbp1P61759 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.23□□□□□ -0.45
Vbp1P61759 Gm44719-201ENSMUST00000206404 149 ntBASIC12.23□□□□□ -0.45
Vbp1P61759 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vbp1P61759 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.23□□□□□ -0.45
Vbp1P61759 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vbp1P61759 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vbp1P61759 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.23□□□□□ -0.45
Vbp1P61759 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vbp1P61759 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Vbp1P61759 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.22□□□□□ -0.45
Vbp1P61759 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.22□□□□□ -0.45
Vbp1P61759 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Vbp1P61759 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.22□□□□□ -0.45
Vbp1P61759 Gm27357-201ENSMUST00000183754 135 ntBASIC12.22□□□□□ -0.45
Vbp1P61759 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.22□□□□□ -0.45
Vbp1P61759 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vbp1P61759 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vbp1P61759 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vbp1P61759 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.22□□□□□ -0.45
Vbp1P61759 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vbp1P61759 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.21□□□□□ -0.45
Vbp1P61759 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms