Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox1P53783 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Sox1P53783 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Sox1P53783 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Mir698-201ENSMUST00000102164 109 ntBASIC13.73□□□□□ -0.21
Sox1P53783 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox1P53783 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.73□□□□□ -0.21
Sox1P53783 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox1P53783 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox1P53783 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox1P53783 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox1P53783 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox1P53783 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Gm25517-201ENSMUST00000083865 134 ntBASIC13.73□□□□□ -0.21
Sox1P53783 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.73□□□□□ -0.21
Sox1P53783 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox1P53783 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox1P53783 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox1P53783 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox1P53783 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Gm9062-201ENSMUST00000117712 727 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Gm12403-201ENSMUST00000121384 959 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox1P53783 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox1P53783 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox1P53783 Gm27046-201ENSMUST00000182160 463 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Gm29155-201ENSMUST00000185910 269 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox1P53783 Gm8885-201ENSMUST00000189382 598 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Gm38144-201ENSMUST00000192790 465 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sox1P53783 Gm5950-201ENSMUST00000213337 772 ntBASIC13.72□□□□□ -0.21
Sox1P53783 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox1P53783 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox1P53783 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox1P53783 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox1P53783 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox1P53783 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sox1P53783 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms