Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nckap1P28660 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nckap1P28660 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nckap1P28660 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nckap1P28660 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.45□□□□□ -0.26
Nckap1P28660 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nckap1P28660 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nckap1P28660 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Gm8213-201ENSMUST00000118191 441 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Gm5687-201ENSMUST00000118252 640 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Gm11803-201ENSMUST00000119966 444 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Gm8062-201ENSMUST00000139696 444 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.44□□□□□ -0.26
Nckap1P28660 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.44□□□□□ -0.26
Nckap1P28660 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Gm37424-201ENSMUST00000191727 561 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Gm6007-201ENSMUST00000208170 823 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.44□□□□□ -0.26
Nckap1P28660 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Gm10478-201ENSMUST00000084451 396 ntBASIC13.44□□□□□ -0.26
Nckap1P28660 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.44□□□□□ -0.26
Nckap1P28660 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nckap1P28660 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.44□□□□□ -0.26
Nckap1P28660 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nckap1P28660 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.43□□□□□ -0.26
Nckap1P28660 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Gm8810-201ENSMUST00000172895 754 ntBASIC13.43□□□□□ -0.26
Nckap1P28660 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nckap1P28660 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nckap1P28660 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Nckap1P28660 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.43□□□□□ -0.26
Nckap1P28660 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nckap1P28660 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms