Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.66□□□□□ -0.38
Clk1P22518 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.66□□□□□ -0.38
Clk1P22518 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.66□□□□□ -0.38
Clk1P22518 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.66□□□□□ -0.38
Clk1P22518 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.66□□□□□ -0.38
Clk1P22518 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Gm29741-201ENSMUST00000192667 421 ntBASIC12.66□□□□□ -0.38
Clk1P22518 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.66□□□□□ -0.38
Clk1P22518 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Clk1P22518 Gm10766-202ENSMUST00000194123 606 ntBASIC12.66□□□□□ -0.38
Clk1P22518 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.66□□□□□ -0.38
Clk1P22518 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.66□□□□□ -0.38
Clk1P22518 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.66□□□□□ -0.38
Clk1P22518 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.66□□□□□ -0.38
Clk1P22518 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.66□□□□□ -0.38
Clk1P22518 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.66□□□□□ -0.38
Clk1P22518 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.66□□□□□ -0.38
Clk1P22518 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Clk1P22518 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.66□□□□□ -0.38
Clk1P22518 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.66□□□□□ -0.38
Clk1P22518 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Clk1P22518 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.65□□□□□ -0.38
Clk1P22518 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Acot6-202ENSMUST00000222921 3622 ntBASIC12.65□□□□□ -0.38
Clk1P22518 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clk1P22518 Gm13223-201ENSMUST00000118609 747 ntBASIC12.65□□□□□ -0.38
Clk1P22518 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.65□□□□□ -0.38
Clk1P22518 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.65□□□□□ -0.38
Clk1P22518 Gm7775-201ENSMUST00000218871 853 ntBASIC12.65□□□□□ -0.38
Clk1P22518 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Clk1P22518 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clk1P22518 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clk1P22518 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clk1P22518 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clk1P22518 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clk1P22518 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Clk1P22518 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clk1P22518 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clk1P22518 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clk1P22518 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clk1P22518 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clk1P22518 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.64□□□□□ -0.39
Clk1P22518 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.64□□□□□ -0.39
Clk1P22518 Gm2445-201ENSMUST00000182798 989 ntBASIC12.64□□□□□ -0.39
Clk1P22518 Mir7684-201ENSMUST00000183858 60 ntBASIC12.64□□□□□ -0.39
Clk1P22518 Mir7023-201ENSMUST00000185093 64 ntBASIC12.64□□□□□ -0.39
Clk1P22518 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clk1P22518 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms