Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.98■□□□□ 0.31
ERCC2P18074 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ERCC2P18074 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.98■□□□□ 0.31
ERCC2P18074 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.98■□□□□ 0.31
ERCC2P18074 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 C20orf181-201ENST00000623918 480 ntBASIC16.98■□□□□ 0.31
ERCC2P18074 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ERCC2P18074 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC2P18074 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC2P18074 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC2P18074 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.97■□□□□ 0.31
ERCC2P18074 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC2P18074 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
ERCC2P18074 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ERCC2P18074 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 AL355306.1-201ENST00000415580 579 ntBASIC16.97■□□□□ 0.31
ERCC2P18074 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.97■□□□□ 0.31
ERCC2P18074 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.97■□□□□ 0.31
ERCC2P18074 RARRES2P8-201ENST00000566335 367 ntBASIC16.97■□□□□ 0.31
ERCC2P18074 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.97■□□□□ 0.31
ERCC2P18074 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ERCC2P18074 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.97■□□□□ 0.31
ERCC2P18074 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ERCC2P18074 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ERCC2P18074 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC2P18074 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.97■□□□□ 0.31
ERCC2P18074 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ERCC2P18074 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ERCC2P18074 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
ERCC2P18074 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ERCC2P18074 REXO1L8P-201ENST00000604378 1897 ntBASIC16.97■□□□□ 0.31
ERCC2P18074 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC2P18074 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC2P18074 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.96■□□□□ 0.31
ERCC2P18074 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.96■□□□□ 0.31
ERCC2P18074 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 AL671277.1-201ENST00000429656 993 ntBASIC16.96■□□□□ 0.31
ERCC2P18074 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.96■□□□□ 0.31
ERCC2P18074 ALG1L5P-201ENST00000482043 771 ntBASIC16.96■□□□□ 0.31
ERCC2P18074 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.96■□□□□ 0.31
ERCC2P18074 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.96■□□□□ 0.31
ERCC2P18074 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.96■□□□□ 0.31
ERCC2P18074 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.96■□□□□ 0.31
ERCC2P18074 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.96■□□□□ 0.31
ERCC2P18074 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.96■□□□□ 0.31
ERCC2P18074 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ERCC2P18074 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.96■□□□□ 0.31
ERCC2P18074 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC2P18074 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ERCC2P18074 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms