Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm13736-201ENSMUST00000119272 253 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Gm27552-201ENSMUST00000183351 62 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Gm27844-201ENSMUST00000183613 62 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Polr2aP08775 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Polr2aP08775 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm12380-201ENSMUST00000119012 544 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm8194-201ENSMUST00000159783 859 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm23363-201ENSMUST00000175024 79 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.11■□□□□ 0.01
Polr2aP08775 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Gm8712-201ENSMUST00000221090 701 ntBASIC15.11■□□□□ 0.01
Polr2aP08775 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2aP08775 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Polr2aP08775 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.1■□□□□ 0.01
Polr2aP08775 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Polr2aP08775 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Polr2aP08775 Sybu-209ENSMUST00000228639 4113 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.1■□□□□ 0.01
Polr2aP08775 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Polr2aP08775 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Polr2aP08775 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.1■□□□□ 0.01
Polr2aP08775 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Polr2aP08775 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.1■□□□□ 0.01
Polr2aP08775 Rprl1-202ENSMUST00000198476 238 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.1■□□□□ 0.01
Polr2aP08775 Gm45433-201ENSMUST00000209386 247 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Polr2aP08775 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Polr2aP08775 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Polr2aP08775 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.1■□□□□ 0.01
Polr2aP08775 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.1■□□□□ 0.01
Polr2aP08775 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2aP08775 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Polr2aP08775 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2aP08775 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Polr2aP08775 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2aP08775 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2aP08775 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms