Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trdmt1O55055 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.81□□□□□ -0.04
Trdmt1O55055 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm24255-201ENSMUST00000104481 128 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm15808-201ENSMUST00000119046 604 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trdmt1O55055 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm3890-201ENSMUST00000182416 207 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm6621-201ENSMUST00000193251 772 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm4768-201ENSMUST00000206199 686 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trdmt1O55055 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trdmt1O55055 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trdmt1O55055 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.8□□□□□ -0.04
Trdmt1O55055 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Gm26185-201ENSMUST00000157692 266 ntBASIC14.8□□□□□ -0.04
Trdmt1O55055 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.8□□□□□ -0.04
Trdmt1O55055 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.8□□□□□ -0.04
Trdmt1O55055 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trdmt1O55055 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.8□□□□□ -0.04
Trdmt1O55055 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdmt1O55055 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Mir877-201ENSMUST00000104738 85 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm4986-201ENSMUST00000119731 549 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.79□□□□□ -0.04
Trdmt1O55055 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Mospd4-201ENSMUST00000180618 576 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm18827-201ENSMUST00000188341 790 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm28693-202ENSMUST00000190758 331 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm37489-201ENSMUST00000191883 159 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.79□□□□□ -0.04
Trdmt1O55055 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.79□□□□□ -0.04
Trdmt1O55055 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdmt1O55055 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.79□□□□□ -0.04
Trdmt1O55055 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdmt1O55055 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdmt1O55055 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trdmt1O55055 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdmt1O55055 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdmt1O55055 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trdmt1O55055 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms