Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Gm12566-201ENSMUST00000121479 359 ntBASIC16.21■□□□□ 0.19
NpcdF8VQB8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NpcdF8VQB8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NpcdF8VQB8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NpcdF8VQB8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NpcdF8VQB8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.2■□□□□ 0.18
NpcdF8VQB8 Gm17330-201ENSMUST00000221047 165 ntBASIC16.2■□□□□ 0.18
NpcdF8VQB8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Morn2-202ENSMUST00000227729 656 ntBASIC16.2■□□□□ 0.18
NpcdF8VQB8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.2■□□□□ 0.18
NpcdF8VQB8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.2■□□□□ 0.18
NpcdF8VQB8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NpcdF8VQB8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Gm2231-201ENSMUST00000125661 612 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Gm2260-201ENSMUST00000184965 657 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms