Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccnb1ip1D3Z3K2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gm45167-201ENSMUST00000208007 322 ntBASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gm10154-201ENSMUST00000084445 354 ntBASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccnb1ip1D3Z3K2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ccnb1ip1D3Z3K2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccnb1ip1D3Z3K2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccnb1ip1D3Z3K2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccnb1ip1D3Z3K2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms