Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Gm27514-201ENSMUST00000183692 110 ntBASIC14.08□□□□□ -0.16
Scn1aA2APX8 Gm27682-201ENSMUST00000183930 110 ntBASIC14.08□□□□□ -0.16
Scn1aA2APX8 Gm28693-202ENSMUST00000190758 331 ntBASIC14.08□□□□□ -0.16
Scn1aA2APX8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.08□□□□□ -0.16
Scn1aA2APX8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn1aA2APX8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Gm40466-201ENSMUST00000212174 422 ntBASIC14.07□□□□□ -0.16
Scn1aA2APX8 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.07□□□□□ -0.16
Scn1aA2APX8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.07□□□□□ -0.16
Scn1aA2APX8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Gm26927-201ENSMUST00000182385 965 ntBASIC14.07□□□□□ -0.16
Scn1aA2APX8 Gm29649-201ENSMUST00000185649 419 ntBASIC14.07□□□□□ -0.16
Scn1aA2APX8 Gm43630-201ENSMUST00000201550 776 ntBASIC14.07□□□□□ -0.16
Scn1aA2APX8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1aA2APX8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.06□□□□□ -0.16
Scn1aA2APX8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.06□□□□□ -0.16
Scn1aA2APX8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.06□□□□□ -0.16
Scn1aA2APX8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.06□□□□□ -0.16
Scn1aA2APX8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.06□□□□□ -0.16
Scn1aA2APX8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1aA2APX8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn1aA2APX8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn1aA2APX8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms