Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 AC027612.4-201ENST00000605371 583 ntBASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 AL355385.1-201ENST00000606123 409 ntBASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPDC1A2A3K4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 AC002056.1-201ENST00000395613 760 ntBASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 GPAA1P2-202ENST00000606848 1787 ntBASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PTPDC1A2A3K4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AC140658.5-201ENST00000438532 169 ntBASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 MIR4515-201ENST00000584082 81 ntBASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AC105339.1-204ENST00000636249 355 ntBASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms