Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rtn4Q99P72 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.61■□□□□ 0.41
Rtn4Q99P72 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Gm14127-201ENSMUST00000117906 678 ntBASIC17.61■□□□□ 0.41
Rtn4Q99P72 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Gm28760-201ENSMUST00000185995 736 ntBASIC17.61■□□□□ 0.41
Rtn4Q99P72 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4Q99P72 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.6■□□□□ 0.41
Rtn4Q99P72 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Gm15393-201ENSMUST00000120499 219 ntBASIC17.6■□□□□ 0.41
Rtn4Q99P72 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rtn4Q99P72 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtn4Q99P72 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Gpr87-201ENSMUST00000056898 1080 ntBASIC17.6■□□□□ 0.41
Rtn4Q99P72 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rtn4Q99P72 BC001981-202ENSMUST00000191393 1545 ntBASIC17.6■□□□□ 0.41
Rtn4Q99P72 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4Q99P72 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Acot6-202ENSMUST00000222921 3622 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Gm42822-201ENSMUST00000200507 1529 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.59■□□□□ 0.41
Rtn4Q99P72 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Gm15460-201ENSMUST00000118147 391 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Gm12138-201ENSMUST00000122180 951 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Rtn4Q99P72 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.59■□□□□ 0.41
Rtn4Q99P72 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4Q99P72 AC117797.1-201ENSMUST00000223977 695 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms