Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2ird2Q99NI3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Gm6983-201ENSMUST00000214912 628 ntBASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gtf2ird2Q99NI3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.91□□□□□ -0.18
Gtf2ird2Q99NI3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Gm2495-201ENSMUST00000191160 466 ntBASIC13.9□□□□□ -0.18
Gtf2ird2Q99NI3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms