Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Nupl1-207ENSMUST00000225311 2475 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Gm12485-201ENSMUST00000119641 291 ntBASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Gm11667-201ENSMUST00000119828 486 ntBASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Gm29155-201ENSMUST00000185910 269 ntBASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Col25a1Q99MQ5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Gm13570-201ENSMUST00000140763 309 ntBASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Gm44967-201ENSMUST00000207047 631 ntBASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col25a1Q99MQ5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Gm7029-201ENSMUST00000173226 450 ntBASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Morn2-202ENSMUST00000227729 656 ntBASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms