Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afjQ8R1M2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
H2afjQ8R1M2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H2afjQ8R1M2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afjQ8R1M2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H2afjQ8R1M2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm24543-201ENSMUST00000103867 82 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm27702-201ENSMUST00000184512 56 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gm5779-201ENSMUST00000218467 910 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Chchd1-203ENSMUST00000224633 557 ntBASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afjQ8R1M2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afjQ8R1M2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afjQ8R1M2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afjQ8R1M2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Mir449b-201ENSMUST00000104833 80 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Gm27430-201ENSMUST00000184585 107 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Gm29541-201ENSMUST00000191351 678 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Gm44333-201ENSMUST00000197168 107 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afjQ8R1M2 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.58□□□□□ -0.4
H2afjQ8R1M2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.57□□□□□ -0.4
H2afjQ8R1M2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afjQ8R1M2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afjQ8R1M2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms