Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpsf4Q8BQZ5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpsf4Q8BQZ5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.15□□□□□ -0.31
Cpsf4Q8BQZ5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpsf4Q8BQZ5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpsf4Q8BQZ5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Gm29741-201ENSMUST00000192667 421 ntBASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4Q8BQZ5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm22189-201ENSMUST00000103822 86 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm12585-201ENSMUST00000117307 290 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm15393-201ENSMUST00000120499 219 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm21854-201ENSMUST00000179901 471 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4Q8BQZ5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms